Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NgfP01139 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NgfP01139 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NgfP01139 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.45□□□□□ -0.42
NgfP01139 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NgfP01139 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NgfP01139 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
NgfP01139 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.44□□□□□ -0.42
NgfP01139 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
NgfP01139 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.44□□□□□ -0.42
NgfP01139 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Gm12485-201ENSMUST00000119641 291 ntBASIC12.44□□□□□ -0.42
NgfP01139 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NgfP01139 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
NgfP01139 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.43□□□□□ -0.42
NgfP01139 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.43□□□□□ -0.42
NgfP01139 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.43□□□□□ -0.42
NgfP01139 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
NgfP01139 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NgfP01139 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NgfP01139 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Sybu-209ENSMUST00000228639 4113 ntBASIC12.43□□□□□ -0.42
NgfP01139 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NgfP01139 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Gm15371-201ENSMUST00000117057 784 ntBASIC12.43□□□□□ -0.42
NgfP01139 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.43□□□□□ -0.42
NgfP01139 Mir1938-201ENSMUST00000158746 100 ntBASIC12.43□□□□□ -0.42
NgfP01139 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Gm29741-201ENSMUST00000192667 421 ntBASIC12.43□□□□□ -0.42
NgfP01139 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Gm6983-201ENSMUST00000214912 628 ntBASIC12.43□□□□□ -0.42
NgfP01139 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.43□□□□□ -0.42
NgfP01139 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.43□□□□□ -0.42
NgfP01139 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
NgfP01139 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NgfP01139 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.43□□□□□ -0.42
NgfP01139 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.43□□□□□ -0.42
NgfP01139 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NgfP01139 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.42□□□□□ -0.42
NgfP01139 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Mir698-201ENSMUST00000102164 109 ntBASIC12.42□□□□□ -0.42
NgfP01139 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NgfP01139 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.42□□□□□ -0.42
NgfP01139 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms