Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.64□□□□□ -0.39
CcnkO88874 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CcnkO88874 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.64□□□□□ -0.39
CcnkO88874 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.64□□□□□ -0.39
CcnkO88874 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.64□□□□□ -0.39
CcnkO88874 Gm2651-201ENSMUST00000203560 838 ntBASIC12.64□□□□□ -0.39
CcnkO88874 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CcnkO88874 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.63□□□□□ -0.39
CcnkO88874 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
CcnkO88874 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CcnkO88874 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CcnkO88874 Gm18733-201ENSMUST00000173950 856 ntBASIC12.63□□□□□ -0.39
CcnkO88874 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.63□□□□□ -0.39
CcnkO88874 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.63□□□□□ -0.39
CcnkO88874 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.63□□□□□ -0.39
CcnkO88874 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.63□□□□□ -0.39
CcnkO88874 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcnkO88874 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CcnkO88874 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CcnkO88874 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.62□□□□□ -0.39
CcnkO88874 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.62□□□□□ -0.39
CcnkO88874 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CcnkO88874 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CcnkO88874 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.62□□□□□ -0.39
CcnkO88874 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CcnkO88874 Gm27300-201ENSMUST00000184085 97 ntBASIC12.62□□□□□ -0.39
CcnkO88874 Gm27335-201ENSMUST00000184758 97 ntBASIC12.62□□□□□ -0.39
CcnkO88874 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.62□□□□□ -0.39
CcnkO88874 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.62□□□□□ -0.39
CcnkO88874 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms