Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.87□□□□□ -0.19
ClppO88696 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.87□□□□□ -0.19
ClppO88696 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
ClppO88696 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
ClppO88696 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.87□□□□□ -0.19
ClppO88696 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ClppO88696 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.87□□□□□ -0.19
ClppO88696 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.87□□□□□ -0.19
ClppO88696 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.87□□□□□ -0.19
ClppO88696 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ClppO88696 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ClppO88696 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.86□□□□□ -0.19
ClppO88696 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.86□□□□□ -0.19
ClppO88696 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.86□□□□□ -0.19
ClppO88696 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.86□□□□□ -0.19
ClppO88696 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.86□□□□□ -0.19
ClppO88696 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.86□□□□□ -0.19
ClppO88696 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ClppO88696 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
ClppO88696 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ClppO88696 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.86□□□□□ -0.19
ClppO88696 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClppO88696 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.85□□□□□ -0.19
ClppO88696 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.85□□□□□ -0.19
ClppO88696 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Gm13464-201ENSMUST00000119418 935 ntBASIC13.85□□□□□ -0.19
ClppO88696 Gm13823-201ENSMUST00000119930 345 ntBASIC13.85□□□□□ -0.19
ClppO88696 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.85□□□□□ -0.19
ClppO88696 Gm23547-201ENSMUST00000158210 271 ntBASIC13.85□□□□□ -0.19
ClppO88696 Gm9719-201ENSMUST00000162765 543 ntBASIC13.85□□□□□ -0.19
ClppO88696 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.85□□□□□ -0.19
ClppO88696 Gm5866-201ENSMUST00000177881 973 ntBASIC13.85□□□□□ -0.19
ClppO88696 Gm27533-201ENSMUST00000183800 152 ntBASIC13.85□□□□□ -0.19
ClppO88696 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.85□□□□□ -0.19
ClppO88696 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ClppO88696 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.85□□□□□ -0.19
ClppO88696 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Gm45098-201ENSMUST00000207179 657 ntBASIC13.85□□□□□ -0.19
ClppO88696 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.85□□□□□ -0.19
ClppO88696 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ClppO88696 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ClppO88696 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
ClppO88696 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ClppO88696 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.85□□□□□ -0.19
ClppO88696 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ClppO88696 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ClppO88696 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms