Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vti1bO88384 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vti1bO88384 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vti1bO88384 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.52□□□□□ -0.25
Vti1bO88384 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.52□□□□□ -0.25
Vti1bO88384 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.52□□□□□ -0.25
Vti1bO88384 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.52□□□□□ -0.25
Vti1bO88384 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.52□□□□□ -0.25
Vti1bO88384 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vti1bO88384 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vti1bO88384 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Vti1bO88384 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vti1bO88384 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1bO88384 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vti1bO88384 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.51□□□□□ -0.25
Vti1bO88384 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vti1bO88384 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.51□□□□□ -0.25
Vti1bO88384 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.51□□□□□ -0.25
Vti1bO88384 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Gm25911-201ENSMUST00000157621 56 ntBASIC13.51□□□□□ -0.25
Vti1bO88384 Rpph1-201ENSMUST00000175096 319 ntBASIC13.51□□□□□ -0.25
Vti1bO88384 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.51□□□□□ -0.25
Vti1bO88384 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.51□□□□□ -0.25
Vti1bO88384 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.51□□□□□ -0.25
Vti1bO88384 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Vti1bO88384 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Vti1bO88384 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vti1bO88384 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vti1bO88384 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1bO88384 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.5□□□□□ -0.25
Vti1bO88384 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.5□□□□□ -0.25
Vti1bO88384 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vti1bO88384 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.5□□□□□ -0.25
Vti1bO88384 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.5□□□□□ -0.25
Vti1bO88384 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.5□□□□□ -0.25
Vti1bO88384 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.5□□□□□ -0.25
Vti1bO88384 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.5□□□□□ -0.25
Vti1bO88384 Gm11594-201ENSMUST00000122313 162 ntBASIC13.5□□□□□ -0.25
Vti1bO88384 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.5□□□□□ -0.25
Vti1bO88384 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Vti1bO88384 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Vti1bO88384 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Vti1bO88384 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1bO88384 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms