Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nid2O88322 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nid2O88322 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nid2O88322 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nid2O88322 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nid2O88322 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nid2O88322 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nid2O88322 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nid2O88322 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.17■□□□□ 0.5
Nid2O88322 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nid2O88322 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nid2O88322 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC18.17■□□□□ 0.5
Nid2O88322 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 Gm37259-201ENSMUST00000193903 849 ntBASIC18.17■□□□□ 0.5
Nid2O88322 Gm17870-201ENSMUST00000219489 1174 ntBASIC18.17■□□□□ 0.5
Nid2O88322 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nid2O88322 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC18.17■□□□□ 0.5
Nid2O88322 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nid2O88322 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC18.16■□□□□ 0.5
Nid2O88322 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC18.16■□□□□ 0.5
Nid2O88322 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC18.16■□□□□ 0.5
Nid2O88322 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC18.16■□□□□ 0.5
Nid2O88322 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nid2O88322 Rn7s1-201ENSMUST00000174924 300 ntBASIC18.16■□□□□ 0.5
Nid2O88322 Rn7s2-201ENSMUST00000175032 300 ntBASIC18.16■□□□□ 0.5
Nid2O88322 Gm26461-201ENSMUST00000175064 290 ntBASIC18.16■□□□□ 0.5
Nid2O88322 Gm5850-201ENSMUST00000192923 1206 ntBASIC18.16■□□□□ 0.5
Nid2O88322 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC18.16■□□□□ 0.5
Nid2O88322 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nid2O88322 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nid2O88322 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nid2O88322 Snora73a-201ENSMUST00000082453 205 ntBASIC18.16■□□□□ 0.5
Nid2O88322 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nid2O88322 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nid2O88322 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nid2O88322 Gm8706-201ENSMUST00000197372 1491 ntBASIC18.16■□□□□ 0.5
Nid2O88322 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Nid2O88322 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nid2O88322 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nid2O88322 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nid2O88322 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nid2O88322 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nid2O88322 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC18.15■□□□□ 0.5
Nid2O88322 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Nid2O88322 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC18.15■□□□□ 0.5
Nid2O88322 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Nid2O88322 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nid2O88322 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Nid2O88322 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.15■□□□□ 0.5
Nid2O88322 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.15■□□□□ 0.5
Nid2O88322 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nid2O88322 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nid2O88322 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Gm15808-201ENSMUST00000119046 604 ntBASIC18.15■□□□□ 0.5
Nid2O88322 Gm11400-201ENSMUST00000120853 1214 ntBASIC18.15■□□□□ 0.5
Nid2O88322 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC18.15■□□□□ 0.5
Nid2O88322 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nid2O88322 Gm42627-201ENSMUST00000197347 224 ntBASIC18.15■□□□□ 0.5
Nid2O88322 Gm44364-201ENSMUST00000198368 141 ntBASIC18.15■□□□□ 0.5
Nid2O88322 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC18.15■□□□□ 0.5
Nid2O88322 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nid2O88322 Gm9755-201ENSMUST00000032981 1356 ntBASIC18.14■□□□□ 0.5
Nid2O88322 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nid2O88322 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.14■□□□□ 0.5
Nid2O88322 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nid2O88322 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nid2O88322 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nid2O88322 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nid2O88322 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nid2O88322 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nid2O88322 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nid2O88322 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nid2O88322 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms