Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Smarce1O54941 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarce1O54941 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarce1O54941 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Smarce1O54941 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarce1O54941 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarce1O54941 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarce1O54941 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarce1O54941 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarce1O54941 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarce1O54941 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarce1O54941 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.83■□□□□ 0.28
Smarce1O54941 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarce1O54941 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarce1O54941 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.83■□□□□ 0.28
Smarce1O54941 Mir8117-201ENSMUST00000184773 107 ntBASIC16.83■□□□□ 0.28
Smarce1O54941 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.83■□□□□ 0.28
Smarce1O54941 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.83■□□□□ 0.28
Smarce1O54941 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smarce1O54941 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smarce1O54941 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smarce1O54941 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smarce1O54941 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Smarce1O54941 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smarce1O54941 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Smarce1O54941 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarce1O54941 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smarce1O54941 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.82■□□□□ 0.28
Smarce1O54941 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smarce1O54941 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Smarce1O54941 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarce1O54941 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.82■□□□□ 0.28
Smarce1O54941 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarce1O54941 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Smarce1O54941 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smarce1O54941 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Smarce1O54941 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.81■□□□□ 0.28
Smarce1O54941 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.81■□□□□ 0.28
Smarce1O54941 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.81■□□□□ 0.28
Smarce1O54941 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarce1O54941 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarce1O54941 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smarce1O54941 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smarce1O54941 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smarce1O54941 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarce1O54941 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Smarce1O54941 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Smarce1O54941 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.8■□□□□ 0.28
Smarce1O54941 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.8■□□□□ 0.28
Smarce1O54941 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms