Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.85□□□□□ -0.19
Npc1O35604 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.85□□□□□ -0.19
Npc1O35604 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Gm44344-201ENSMUST00000200287 129 ntBASIC13.85□□□□□ -0.19
Npc1O35604 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.85□□□□□ -0.19
Npc1O35604 Gm16476-201ENSMUST00000221544 139 ntBASIC13.85□□□□□ -0.19
Npc1O35604 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.85□□□□□ -0.19
Npc1O35604 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Npc1O35604 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Npc1O35604 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npc1O35604 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Npc1O35604 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.84□□□□□ -0.19
Npc1O35604 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Npc1O35604 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.84□□□□□ -0.19
Npc1O35604 Gm27631-201ENSMUST00000184163 466 ntBASIC13.84□□□□□ -0.19
Npc1O35604 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.84□□□□□ -0.19
Npc1O35604 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.84□□□□□ -0.19
Npc1O35604 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.84□□□□□ -0.19
Npc1O35604 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Npc1O35604 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Npc1O35604 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Npc1O35604 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Npc1O35604 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Npc1O35604 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Npc1O35604 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Npc1O35604 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Npc1O35604 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Npc1O35604 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.83□□□□□ -0.2
Npc1O35604 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.83□□□□□ -0.2
Npc1O35604 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.83□□□□□ -0.2
Npc1O35604 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.83□□□□□ -0.2
Npc1O35604 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.83□□□□□ -0.2
Npc1O35604 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Npc1O35604 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Npc1O35604 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Npc1O35604 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Npc1O35604 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Npc1O35604 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Npc1O35604 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npc1O35604 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npc1O35604 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Npc1O35604 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Npc1O35604 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npc1O35604 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npc1O35604 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npc1O35604 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.82□□□□□ -0.2
Npc1O35604 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Npc1O35604 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npc1O35604 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npc1O35604 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Npc1O35604 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Npc1O35604 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Npc1O35604 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Npc1O35604 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms