Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.34□□□□□ -0.27
Cx3cl1O35188 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Gm23547-201ENSMUST00000158210 271 ntBASIC13.34□□□□□ -0.27
Cx3cl1O35188 AA543401-201ENSMUST00000164248 1269 ntBASIC13.34□□□□□ -0.27
Cx3cl1O35188 Gm27618-201ENSMUST00000183671 60 ntBASIC13.34□□□□□ -0.27
Cx3cl1O35188 Gm27631-201ENSMUST00000184163 466 ntBASIC13.34□□□□□ -0.27
Cx3cl1O35188 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.34□□□□□ -0.27
Cx3cl1O35188 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.34□□□□□ -0.27
Cx3cl1O35188 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.34□□□□□ -0.27
Cx3cl1O35188 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cl1O35188 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cx3cl1O35188 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cx3cl1O35188 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cx3cl1O35188 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.33□□□□□ -0.28
Cx3cl1O35188 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cl1O35188 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cx3cl1O35188 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.32□□□□□ -0.28
Cx3cl1O35188 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Gm24543-201ENSMUST00000103867 82 ntBASIC13.32□□□□□ -0.28
Cx3cl1O35188 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Gm45453-201ENSMUST00000211758 853 ntBASIC13.32□□□□□ -0.28
Cx3cl1O35188 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.32□□□□□ -0.28
Cx3cl1O35188 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms