Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.91□□□□□ -0.18
Bhlhe40O35185 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.91□□□□□ -0.18
Bhlhe40O35185 Gm28631-201ENSMUST00000190740 334 ntBASIC13.91□□□□□ -0.18
Bhlhe40O35185 Gm6745-201ENSMUST00000199216 526 ntBASIC13.91□□□□□ -0.18
Bhlhe40O35185 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.91□□□□□ -0.18
Bhlhe40O35185 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.9□□□□□ -0.18
Bhlhe40O35185 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.9□□□□□ -0.18
Bhlhe40O35185 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.9□□□□□ -0.18
Bhlhe40O35185 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.9□□□□□ -0.18
Bhlhe40O35185 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Bhlhe40O35185 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Gm37917-201ENSMUST00000194711 392 ntBASIC13.9□□□□□ -0.18
Bhlhe40O35185 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.9□□□□□ -0.18
Bhlhe40O35185 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Bhlhe40O35185 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Bhlhe40O35185 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.9□□□□□ -0.19
Bhlhe40O35185 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Bhlhe40O35185 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Bhlhe40O35185 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Bhlhe40O35185 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Gm12138-201ENSMUST00000122180 951 ntBASIC13.89□□□□□ -0.19
Bhlhe40O35185 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Gm45668-201ENSMUST00000211271 493 ntBASIC13.89□□□□□ -0.19
Bhlhe40O35185 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Bhlhe40O35185 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Bhlhe40O35185 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Bhlhe40O35185 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Bhlhe40O35185 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms