Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.32■□□□□ 0.04
Ube3aO08759 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.32■□□□□ 0.04
Ube3aO08759 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.32■□□□□ 0.04
Ube3aO08759 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.32■□□□□ 0.04
Ube3aO08759 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.32■□□□□ 0.04
Ube3aO08759 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ube3aO08759 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ube3aO08759 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ube3aO08759 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Ube3aO08759 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.31■□□□□ 0.04
Ube3aO08759 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.31■□□□□ 0.04
Ube3aO08759 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.31■□□□□ 0.04
Ube3aO08759 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.31■□□□□ 0.04
Ube3aO08759 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.31■□□□□ 0.04
Ube3aO08759 Gm5364-201ENSMUST00000216789 889 ntBASIC15.31■□□□□ 0.04
Ube3aO08759 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ube3aO08759 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.31■□□□□ 0.04
Ube3aO08759 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3aO08759 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ube3aO08759 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Ube3aO08759 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.3■□□□□ 0.04
Ube3aO08759 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.3■□□□□ 0.04
Ube3aO08759 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ube3aO08759 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.3■□□□□ 0.04
Ube3aO08759 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.3■□□□□ 0.04
Ube3aO08759 Gm27300-201ENSMUST00000184085 97 ntBASIC15.3■□□□□ 0.04
Ube3aO08759 Gm27335-201ENSMUST00000184758 97 ntBASIC15.3■□□□□ 0.04
Ube3aO08759 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.3■□□□□ 0.04
Ube3aO08759 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.3■□□□□ 0.04
Ube3aO08759 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ube3aO08759 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.3■□□□□ 0.04
Ube3aO08759 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.3■□□□□ 0.04
Ube3aO08759 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.3■□□□□ 0.04
Ube3aO08759 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ube3aO08759 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ube3aO08759 Gm15590-201ENSMUST00000078419 552 ntBASIC15.3■□□□□ 0.04
Ube3aO08759 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Ube3aO08759 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ube3aO08759 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3aO08759 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.29■□□□□ 0.04
Ube3aO08759 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ube3aO08759 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ube3aO08759 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.29■□□□□ 0.04
Ube3aO08759 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms