Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Gm27628-201ENSMUST00000184911 107 ntBASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Gm15590-201ENSMUST00000078419 552 ntBASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Acot6-202ENSMUST00000222921 3622 ntBASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh1F7BJK1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Thap2-203ENSMUST00000218989 527 ntBASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Gm7461-201ENSMUST00000058918 827 ntBASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms