Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gm44985-201ENSMUST00000206202 1016 ntBASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Gm21769-201ENSMUST00000211922 111 ntBASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Gm7046-201ENSMUST00000221351 977 ntBASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc85cE9Q6B2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Gm5687-201ENSMUST00000118252 640 ntBASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Gm2260-201ENSMUST00000184965 657 ntBASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Gm37497-201ENSMUST00000195830 798 ntBASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Gm8959-201ENSMUST00000213150 571 ntBASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Gm10146-201ENSMUST00000072739 309 ntBASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ccdc85cE9Q6B2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc85cE9Q6B2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc85cE9Q6B2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ccdc85cE9Q6B2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc85cE9Q6B2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc85cE9Q6B2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc85cE9Q6B2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ccdc85cE9Q6B2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc85cE9Q6B2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc85cE9Q6B2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.27■□□□□ 0.35
Ccdc85cE9Q6B2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Gm44608-201ENSMUST00000206827 855 ntBASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Gm19208-201ENSMUST00000213861 912 ntBASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc85cE9Q6B2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85cE9Q6B2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85cE9Q6B2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc85cE9Q6B2 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.25■□□□□ 0.35
Ccdc85cE9Q6B2 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.25■□□□□ 0.35
Ccdc85cE9Q6B2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85cE9Q6B2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85cE9Q6B2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms