Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Gm9797-201ENSMUST00000052902 613 ntBASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb9E9Q5G2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb9E9Q5G2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb9E9Q5G2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms