Protein–RNA interactions for Protein: E9PYU5

Gm44503, Predicted readthrough transcript (NMD candidate), 44503, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm44503E9PYU5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Gm12957-201ENSMUST00000117835 377 ntBASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm44503E9PYU5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm27486-201ENSMUST00000184923 80 ntBASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm19078-201ENSMUST00000206311 727 ntBASIC16.19■□□□□ 0.18
Gm44503E9PYU5 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm44503E9PYU5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Gm8463-201ENSMUST00000208573 613 ntBASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Gm18027-201ENSMUST00000218947 619 ntBASIC16.18■□□□□ 0.18
Gm44503E9PYU5 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm44503E9PYU5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm44503E9PYU5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm44503E9PYU5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Gm44503E9PYU5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Gm44503E9PYU5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm44503E9PYU5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms