Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Gm14057-201ENSMUST00000120631 482 ntBASIC12.84□□□□□ -0.35
Gm3543D3Z235 Gm25144-201ENSMUST00000179561 110 ntBASIC12.84□□□□□ -0.35
Gm3543D3Z235 Gm25352-201ENSMUST00000179815 110 ntBASIC12.84□□□□□ -0.35
Gm3543D3Z235 Gm9726-201ENSMUST00000180321 678 ntBASIC12.84□□□□□ -0.35
Gm3543D3Z235 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.84□□□□□ -0.35
Gm3543D3Z235 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3543D3Z235 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm3543D3Z235 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm3543D3Z235 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm3543D3Z235 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.83□□□□□ -0.35
Gm3543D3Z235 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.83□□□□□ -0.35
Gm3543D3Z235 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Gm13015-201ENSMUST00000118674 204 ntBASIC12.83□□□□□ -0.36
Gm3543D3Z235 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Gm27622-201ENSMUST00000183779 60 ntBASIC12.83□□□□□ -0.36
Gm3543D3Z235 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.83□□□□□ -0.36
Gm3543D3Z235 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3543D3Z235 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.82□□□□□ -0.36
Gm3543D3Z235 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.82□□□□□ -0.36
Gm3543D3Z235 Gm2451-201ENSMUST00000199447 999 ntBASIC12.82□□□□□ -0.36
Gm3543D3Z235 Gm10290-201ENSMUST00000200451 999 ntBASIC12.82□□□□□ -0.36
Gm3543D3Z235 Gm20949-201ENSMUST00000206478 952 ntBASIC12.82□□□□□ -0.36
Gm3543D3Z235 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3543D3Z235 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms