Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Clrn2B2RVW2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn2B2RVW2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn2B2RVW2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Clrn2B2RVW2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn2B2RVW2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn2B2RVW2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Gm26464-201ENSMUST00000157094 305 ntBASIC16.33■□□□□ 0.2
Clrn2B2RVW2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Gm7287-201ENSMUST00000205267 602 ntBASIC16.33■□□□□ 0.2
Clrn2B2RVW2 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn2B2RVW2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gm8062-201ENSMUST00000139696 444 ntBASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.32■□□□□ 0.2
Clrn2B2RVW2 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Gm6091-201ENSMUST00000098307 165 ntBASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn2B2RVW2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn2B2RVW2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms