Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Gm3890-201ENSMUST00000182416 207 ntBASIC11.34□□□□□ -0.59
Chd6A3KFM7 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Gm19640-201ENSMUST00000214849 464 ntBASIC11.34□□□□□ -0.59
Chd6A3KFM7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Gm14208-201ENSMUST00000119645 678 ntBASIC11.34□□□□□ -0.59
Chd6A3KFM7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Gm23699-201ENSMUST00000158835 135 ntBASIC11.34□□□□□ -0.59
Chd6A3KFM7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.34□□□□□ -0.59
Chd6A3KFM7 Gm38210-201ENSMUST00000191944 809 ntBASIC11.34□□□□□ -0.59
Chd6A3KFM7 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd6A3KFM7 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Chd6A3KFM7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd6A3KFM7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Gm8365-201ENSMUST00000197334 648 ntBASIC11.33□□□□□ -0.6
Chd6A3KFM7 Gm13097-201ENSMUST00000210722 397 ntBASIC11.33□□□□□ -0.6
Chd6A3KFM7 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.33□□□□□ -0.6
Chd6A3KFM7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.33□□□□□ -0.6
Chd6A3KFM7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chd6A3KFM7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.33□□□□□ -0.6
Chd6A3KFM7 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.33□□□□□ -0.6
Chd6A3KFM7 Gm8325-201ENSMUST00000099086 453 ntBASIC11.33□□□□□ -0.6
Chd6A3KFM7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms