Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap99A0A140LIX9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap99A0A140LIX9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfap99A0A140LIX9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm29310-201ENSMUST00000185468 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21825-201ENSMUST00000185728 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm29109-201ENSMUST00000185895 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21896-201ENSMUST00000186520 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21873-201ENSMUST00000186728 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21794-201ENSMUST00000187056 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21880-201ENSMUST00000187275 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21826-201ENSMUST00000187451 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21198-201ENSMUST00000188393 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21749-201ENSMUST00000189343 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21901-201ENSMUST00000189568 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm29424-201ENSMUST00000189716 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm28599-201ENSMUST00000189838 694 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21867-201ENSMUST00000189917 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm29269-201ENSMUST00000190087 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21722-201ENSMUST00000190153 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm28423-201ENSMUST00000190701 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21899-201ENSMUST00000190745 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21910-201ENSMUST00000191163 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21849-201ENSMUST00000191571 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm28678-201ENSMUST00000191593 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm20910-201ENSMUST00000193268 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm21871-201ENSMUST00000194621 696 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm6745-201ENSMUST00000199216 526 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Cfap99A0A140LIX9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Gm6222-201ENSMUST00000120787 396 ntBASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cfap99A0A140LIX9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Gm23984-201ENSMUST00000157139 203 ntBASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Gm43703-201ENSMUST00000200523 763 ntBASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Dupd1-202ENSMUST00000224735 548 ntBASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap99A0A140LIX9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms