Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc194A0A140LIT1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Gm11025-201ENSMUST00000140773 466 ntBASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc194A0A140LIT1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc194A0A140LIT1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc194A0A140LIT1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc194A0A140LIT1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc194A0A140LIT1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.08□□□□□ -0.15
Ccdc194A0A140LIT1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc194A0A140LIT1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Gm18206-201ENSMUST00000207027 926 ntBASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc194A0A140LIT1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms