Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm7977-201ENSMUST00000193787 748 ntBASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm45630-201ENSMUST00000210243 1911 ntBASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm37411-201ENSMUST00000194180 2282 ntBASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm37844-201ENSMUST00000192473 4097 ntBASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm14042-201ENSMUST00000120139 833 ntBASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm6944-201ENSMUST00000182449 1006 ntBASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm5864-201ENSMUST00000202263 970 ntBASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm15590-201ENSMUST00000078419 552 ntBASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm9252-201ENSMUST00000172364 1602 ntBASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms