Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.9□□□□□ -0.66
PdfS4R2K0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.9□□□□□ -0.66
PdfS4R2K0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
PdfS4R2K0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
PdfS4R2K0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
PdfS4R2K0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.9□□□□□ -0.66
PdfS4R2K0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
PdfS4R2K0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
PdfS4R2K0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
PdfS4R2K0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PdfS4R2K0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PdfS4R2K0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.9□□□□□ -0.67
PdfS4R2K0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.67
PdfS4R2K0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
PdfS4R2K0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.89□□□□□ -0.67
PdfS4R2K0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
PdfS4R2K0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
PdfS4R2K0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
PdfS4R2K0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.89□□□□□ -0.67
PdfS4R2K0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
PdfS4R2K0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.89□□□□□ -0.67
PdfS4R2K0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.89□□□□□ -0.67
PdfS4R2K0 Gm6089-201ENSMUST00000197666 938 ntBASIC10.89□□□□□ -0.67
PdfS4R2K0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
PdfS4R2K0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
PdfS4R2K0 AV026068-213ENSMUST00000223675 1171 ntBASIC10.89□□□□□ -0.67
PdfS4R2K0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
PdfS4R2K0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.89□□□□□ -0.67
PdfS4R2K0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.89□□□□□ -0.67
PdfS4R2K0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PdfS4R2K0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
PdfS4R2K0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
PdfS4R2K0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
PdfS4R2K0 Gm3928-201ENSMUST00000121141 1307 ntBASIC10.88□□□□□ -0.67
PdfS4R2K0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
PdfS4R2K0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Gm13418-201ENSMUST00000119097 944 ntBASIC10.88□□□□□ -0.67
PdfS4R2K0 Gm11764-201ENSMUST00000120221 623 ntBASIC10.88□□□□□ -0.67
PdfS4R2K0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.88□□□□□ -0.67
PdfS4R2K0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
PdfS4R2K0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.88□□□□□ -0.67
PdfS4R2K0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.88□□□□□ -0.67
PdfS4R2K0 Mir5126-201ENSMUST00000175513 77 ntBASIC10.88□□□□□ -0.67
PdfS4R2K0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
PdfS4R2K0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
PdfS4R2K0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Gm43767-201ENSMUST00000198933 381 ntBASIC10.88□□□□□ -0.67
PdfS4R2K0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.88□□□□□ -0.67
PdfS4R2K0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.88□□□□□ -0.67
PdfS4R2K0 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms