Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm18905-201ENSMUST00000205454 928 ntBASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Gm17795-201ENSMUST00000214505 757 ntBASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Mir6392-201ENSMUST00000184924 108 ntBASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Gm6180-201ENSMUST00000065243 498 ntBASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcb1Q9Z0H3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Gm15240-201ENSMUST00000118156 720 ntBASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Gm24420-201ENSMUST00000176676 59 ntBASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Gm6745-201ENSMUST00000199216 526 ntBASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcb1Q9Z0H3 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Gm12091-201ENSMUST00000146791 830 ntBASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Gm23984-201ENSMUST00000157139 203 ntBASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Gm7653-201ENSMUST00000214567 508 ntBASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcb1Q9Z0H3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms