Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Gm6415-201ENSMUST00000118488 348 ntBASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Gm15693-201ENSMUST00000120470 637 ntBASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Gm9719-201ENSMUST00000162765 543 ntBASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn3Q9Z0G9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Gm8410-201ENSMUST00000117225 605 ntBASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Gm25948-201ENSMUST00000175334 112 ntBASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Gm27631-201ENSMUST00000184163 466 ntBASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Gm45453-201ENSMUST00000211758 853 ntBASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms