Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.05□□□□□ -0.64
CcsQ9WU84 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
CcsQ9WU84 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
CcsQ9WU84 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Gm7222-201ENSMUST00000117512 906 ntBASIC11.05□□□□□ -0.64
CcsQ9WU84 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Gm12350-201ENSMUST00000121208 462 ntBASIC11.05□□□□□ -0.64
CcsQ9WU84 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.05□□□□□ -0.64
CcsQ9WU84 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
CcsQ9WU84 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.05□□□□□ -0.64
CcsQ9WU84 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
CcsQ9WU84 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.05□□□□□ -0.64
CcsQ9WU84 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.05□□□□□ -0.64
CcsQ9WU84 Gm18622-201ENSMUST00000219361 595 ntBASIC11.05□□□□□ -0.64
CcsQ9WU84 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.05□□□□□ -0.64
CcsQ9WU84 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.05□□□□□ -0.64
CcsQ9WU84 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CcsQ9WU84 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CcsQ9WU84 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CcsQ9WU84 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.04□□□□□ -0.64
CcsQ9WU84 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.04□□□□□ -0.64
CcsQ9WU84 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CcsQ9WU84 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.04□□□□□ -0.64
CcsQ9WU84 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CcsQ9WU84 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CcsQ9WU84 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CcsQ9WU84 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms