Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl28Q9JIL2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl28Q9JIL2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl28Q9JIL2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl28Q9JIL2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl28Q9JIL2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl28Q9JIL2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccl28Q9JIL2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Gm9727-201ENSMUST00000161387 555 ntBASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl28Q9JIL2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Gm12260-201ENSMUST00000122447 411 ntBASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Gm44492-201ENSMUST00000197012 141 ntBASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccl28Q9JIL2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl28Q9JIL2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl28Q9JIL2 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.46□□□□□ -0.58
Ccl28Q9JIL2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl28Q9JIL2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl28Q9JIL2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl28Q9JIL2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Matn2-206ENSMUST00000228570 2798 ntBASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms