Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube3bQ9ES34 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Gm28631-201ENSMUST00000190740 334 ntBASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube3bQ9ES34 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Gm13385-201ENSMUST00000121089 220 ntBASIC16.8■□□□□ 0.28
Ube3bQ9ES34 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Gm17795-201ENSMUST00000214505 757 ntBASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.8■□□□□ 0.28
Ube3bQ9ES34 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.8■□□□□ 0.28
Ube3bQ9ES34 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms