Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk4Q9ERK0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Gm9794-201ENSMUST00000202370 423 ntBASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ripk4Q9ERK0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Gm7653-201ENSMUST00000214567 508 ntBASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk4Q9ERK0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 AA619741-201ENSMUST00000195095 646 ntBASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk4Q9ERK0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ripk4Q9ERK0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ripk4Q9ERK0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ripk4Q9ERK0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Ripk4Q9ERK0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ripk4Q9ERK0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ripk4Q9ERK0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ripk4Q9ERK0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms