Protein–RNA interactions for Protein: Q9EQ41

Vmn1r29, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r29Q9EQ41 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Gm44492-201ENSMUST00000197012 141 ntBASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmn1r29Q9EQ41 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Gm10275-202ENSMUST00000168697 495 ntBASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Psmb5-202ENSMUST00000227257 622 ntBASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Mzt1-203ENSMUST00000227948 952 ntBASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Gm10275-201ENSMUST00000092620 635 ntBASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmn1r29Q9EQ41 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Gm18733-201ENSMUST00000173950 856 ntBASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Rpph1-201ENSMUST00000175096 319 ntBASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmn1r29Q9EQ41 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vmn1r29Q9EQ41 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vmn1r29Q9EQ41 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Vmn1r29Q9EQ41 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.14□□□□□ -0.31
Vmn1r29Q9EQ41 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vmn1r29Q9EQ41 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms