Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Hmgn3Q9DCB1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hmgn3Q9DCB1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Hmgn3Q9DCB1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hmgn3Q9DCB1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Hmgn3Q9DCB1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hmgn3Q9DCB1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Hmgn3Q9DCB1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hmgn3Q9DCB1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Hmgn3Q9DCB1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgn3Q9DCB1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Gm12895-201ENSMUST00000122214 226 ntBASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Gm18489-201ENSMUST00000172565 551 ntBASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Gm2451-201ENSMUST00000199447 999 ntBASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Gm10290-201ENSMUST00000200451 999 ntBASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgn3Q9DCB1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms