Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Gm13223-201ENSMUST00000118609 747 ntBASIC13.21□□□□□ -0.29
Cdc40Q9DC48 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Gm6888-201ENSMUST00000221983 706 ntBASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdc40Q9DC48 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cdc40Q9DC48 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.21□□□□□ -0.3
Cdc40Q9DC48 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Cdc40Q9DC48 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Cdc40Q9DC48 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Gm14042-201ENSMUST00000120139 833 ntBASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.2□□□□□ -0.3
Cdc40Q9DC48 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdc40Q9DC48 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Gm5479-201ENSMUST00000160578 435 ntBASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdc40Q9DC48 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Gm13015-201ENSMUST00000118674 204 ntBASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Gm13453-201ENSMUST00000118708 357 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms