Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Gm13823-201ENSMUST00000119930 345 ntBASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Gm43474-201ENSMUST00000196415 774 ntBASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Gm45453-201ENSMUST00000211758 853 ntBASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Gm5566-201ENSMUST00000116118 459 ntBASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Gm14822-201ENSMUST00000122247 291 ntBASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4bQ9D8B3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 AA543401-201ENSMUST00000164248 1269 ntBASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Gm6736-201ENSMUST00000166583 948 ntBASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Gm10253-201ENSMUST00000194270 940 ntBASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Chchd1-203ENSMUST00000224633 557 ntBASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4bQ9D8B3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4bQ9D8B3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4bQ9D8B3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4bQ9D8B3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chmp4bQ9D8B3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4bQ9D8B3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms