Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Gm23935-201ENSMUST00000102303 57 ntBASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Gm24270-201ENSMUST00000102326 57 ntBASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Gm5566-201ENSMUST00000116118 459 ntBASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Gm24245-201ENSMUST00000157318 57 ntBASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Gm9719-201ENSMUST00000162765 543 ntBASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Gm10253-201ENSMUST00000194270 940 ntBASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Gm43575-201ENSMUST00000196420 516 ntBASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Gm44608-201ENSMUST00000206827 855 ntBASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Gm45453-201ENSMUST00000211758 853 ntBASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx56Q9D0R4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx56Q9D0R4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Gm7774-201ENSMUST00000200064 533 ntBASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx56Q9D0R4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx56Q9D0R4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms