Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.69■□□□□ 0.26
Smc3Q9CW03 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.69■□□□□ 0.26
Smc3Q9CW03 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.68■□□□□ 0.26
Smc3Q9CW03 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc3Q9CW03 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.67■□□□□ 0.26
Smc3Q9CW03 Gm11543-201ENSMUST00000120758 370 ntBASIC16.67■□□□□ 0.26
Smc3Q9CW03 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.67■□□□□ 0.26
Smc3Q9CW03 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.67■□□□□ 0.26
Smc3Q9CW03 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.67■□□□□ 0.26
Smc3Q9CW03 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc3Q9CW03 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.66■□□□□ 0.26
Smc3Q9CW03 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc3Q9CW03 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.66■□□□□ 0.26
Smc3Q9CW03 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.66■□□□□ 0.26
Smc3Q9CW03 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Matn2-206ENSMUST00000228570 2798 ntBASIC16.65■□□□□ 0.26
Smc3Q9CW03 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms