Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim34aQ99PP6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim34aQ99PP6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim34aQ99PP6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim34aQ99PP6 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.43■□□□□ 0.38
Trim34aQ99PP6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.43■□□□□ 0.38
Trim34aQ99PP6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Gm11524-201ENSMUST00000119349 807 ntBASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 AY702102-202ENSMUST00000194651 1173 ntBASIC17.42■□□□□ 0.38
Trim34aQ99PP6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim34aQ99PP6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Gm24420-201ENSMUST00000176676 59 ntBASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Gm8927-201ENSMUST00000181978 981 ntBASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.41■□□□□ 0.38
Trim34aQ99PP6 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.41■□□□□ 0.38
Trim34aQ99PP6 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Gm3222-201ENSMUST00000071282 990 ntBASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim34aQ99PP6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim34aQ99PP6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms