Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.04■□□□□ -0
Sf3b1Q99NB9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.04■□□□□ -0
Sf3b1Q99NB9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Gm45668-201ENSMUST00000211271 493 ntBASIC15.04■□□□□ -0
Sf3b1Q99NB9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.04■□□□□ -0
Sf3b1Q99NB9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.04■□□□□ -0
Sf3b1Q99NB9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.04■□□□□ -0
Sf3b1Q99NB9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b1Q99NB9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.03■□□□□ -0
Sf3b1Q99NB9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.03■□□□□ -0
Sf3b1Q99NB9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Gm12091-201ENSMUST00000146791 830 ntBASIC15.03■□□□□ -0
Sf3b1Q99NB9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Gm19220-201ENSMUST00000222682 803 ntBASIC15.03■□□□□ -0
Sf3b1Q99NB9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b1Q99NB9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b1Q99NB9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sf3b1Q99NB9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b1Q99NB9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3b1Q99NB9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b1Q99NB9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b1Q99NB9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b1Q99NB9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3b1Q99NB9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.02■□□□□ -0
Sf3b1Q99NB9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3b1Q99NB9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.02■□□□□ -0
Sf3b1Q99NB9 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.02■□□□□ -0
Sf3b1Q99NB9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3b1Q99NB9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b1Q99NB9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b1Q99NB9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b1Q99NB9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Sf3b1Q99NB9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b1Q99NB9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b1Q99NB9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b1Q99NB9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Sf3b1Q99NB9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b1Q99NB9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Gm18624-201ENSMUST00000220966 658 ntBASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.01□□□□□ -0.01
Sf3b1Q99NB9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms