Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Gm6334-201ENSMUST00000207083 228 ntBASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Gm18935-201ENSMUST00000212692 664 ntBASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Snord83b-201ENSMUST00000104546 94 ntBASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Gm12928-201ENSMUST00000117115 573 ntBASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Gm24644-201ENSMUST00000157114 139 ntBASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col25a1Q99MQ5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Gm22018-201ENSMUST00000104357 131 ntBASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Gm16177-201ENSMUST00000120728 718 ntBASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Proscos-202ENSMUST00000178990 666 ntBASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Gm42627-201ENSMUST00000197347 224 ntBASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Gm10012-201ENSMUST00000078252 192 ntBASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col25a1Q99MQ5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms