Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Gm43575-201ENSMUST00000196420 516 ntBASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Gm45098-201ENSMUST00000207179 657 ntBASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1b1Q99LU0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1b1Q99LU0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Gm6973-201ENSMUST00000117080 721 ntBASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Gm26308-201ENSMUST00000157768 69 ntBASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Gm27920-201ENSMUST00000183953 96 ntBASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Chmp1b1Q99LU0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms