Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cdk5rap3Q99LM2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdk5rap3Q99LM2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdk5rap3Q99LM2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Gm6973-201ENSMUST00000117080 721 ntBASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Gm15427-201ENSMUST00000117288 531 ntBASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdk5rap3Q99LM2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Gm11543-201ENSMUST00000120758 370 ntBASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap3Q99LM2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap3Q99LM2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms