Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.73□□□□□ -0.21
Cstf3Q99LI7 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.73□□□□□ -0.21
Cstf3Q99LI7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Gm18057-201ENSMUST00000208220 503 ntBASIC13.72□□□□□ -0.21
Cstf3Q99LI7 AW822252-206ENSMUST00000208904 237 ntBASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.72□□□□□ -0.21
Cstf3Q99LI7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf3Q99LI7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Gm2810-201ENSMUST00000118681 990 ntBASIC13.71□□□□□ -0.21
Cstf3Q99LI7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Gm8584-201ENSMUST00000171982 758 ntBASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf3Q99LI7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms