Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 BC037039-201ENSMUST00000192003 2205 ntBASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 BC001981-202ENSMUST00000191393 1545 ntBASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Gm15198-201ENSMUST00000117283 177 ntBASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Snora78-201ENSMUST00000158630 128 ntBASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Gm17795-201ENSMUST00000214505 757 ntBASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf1Q99LC2 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Olfr286-202ENSMUST00000205305 969 ntBASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf1Q99LC2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms