Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.61■□□□□ 0.25
Hps4Q99KG7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.61■□□□□ 0.25
Hps4Q99KG7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.61■□□□□ 0.25
Hps4Q99KG7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.61■□□□□ 0.25
Hps4Q99KG7 Gm18905-201ENSMUST00000205454 928 ntBASIC16.61■□□□□ 0.25
Hps4Q99KG7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Hps4Q99KG7 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.61■□□□□ 0.25
Hps4Q99KG7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.61■□□□□ 0.25
Hps4Q99KG7 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.61■□□□□ 0.25
Hps4Q99KG7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Hps4Q99KG7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps4Q99KG7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Gm18307-201ENSMUST00000206864 949 ntBASIC16.6■□□□□ 0.25
Hps4Q99KG7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.6■□□□□ 0.25
Hps4Q99KG7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.6■□□□□ 0.25
Hps4Q99KG7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.6■□□□□ 0.25
Hps4Q99KG7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hps4Q99KG7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.6■□□□□ 0.25
Hps4Q99KG7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Hps4Q99KG7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Gm9002-201ENSMUST00000178437 499 ntBASIC16.59■□□□□ 0.25
Hps4Q99KG7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.59■□□□□ 0.25
Hps4Q99KG7 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.59■□□□□ 0.25
Hps4Q99KG7 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.59■□□□□ 0.25
Hps4Q99KG7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Hps4Q99KG7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.59■□□□□ 0.25
Hps4Q99KG7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.59■□□□□ 0.25
Hps4Q99KG7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps4Q99KG7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hps4Q99KG7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hps4Q99KG7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hps4Q99KG7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hps4Q99KG7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hps4Q99KG7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hps4Q99KG7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.58■□□□□ 0.24
Hps4Q99KG7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hps4Q99KG7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hps4Q99KG7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms