Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.31□□□□□ -0.12
Cdk9Q99J95 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Gm44771-201ENSMUST00000206975 626 ntBASIC14.31□□□□□ -0.12
Cdk9Q99J95 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.31□□□□□ -0.12
Cdk9Q99J95 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.31□□□□□ -0.12
Cdk9Q99J95 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cdk9Q99J95 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.3□□□□□ -0.12
Cdk9Q99J95 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Cdk9Q99J95 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.3□□□□□ -0.12
Cdk9Q99J95 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Gm7787-201ENSMUST00000216858 688 ntBASIC14.3□□□□□ -0.12
Cdk9Q99J95 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk9Q99J95 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Gm25990-201ENSMUST00000102440 86 ntBASIC14.29□□□□□ -0.12
Cdk9Q99J95 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Gm8749-201ENSMUST00000117737 331 ntBASIC14.29□□□□□ -0.12
Cdk9Q99J95 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.29□□□□□ -0.12
Cdk9Q99J95 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.29□□□□□ -0.12
Cdk9Q99J95 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk9Q99J95 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Gm6089-201ENSMUST00000197666 938 ntBASIC14.28□□□□□ -0.12
Cdk9Q99J95 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Cdk9Q99J95 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.28□□□□□ -0.12
Cdk9Q99J95 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms