Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac1Q91Y10 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Gm15427-201ENSMUST00000117288 531 ntBASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Gm16026-204ENSMUST00000162652 683 ntBASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac1Q91Y10 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhac1Q91Y10 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhac1Q91Y10 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms