Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.08■□□□□ 0.01
Pcdhb2Q91Y00 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb2Q91Y00 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb2Q91Y00 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb2Q91Y00 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb2Q91Y00 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb2Q91Y00 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb2Q91Y00 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb2Q91Y00 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb2Q91Y00 BC001981-202ENSMUST00000191393 1545 ntBASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb2Q91Y00 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Gm12151-201ENSMUST00000121374 290 ntBASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Gm9063-201ENSMUST00000223299 582 ntBASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb2Q91Y00 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb2Q91Y00 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb2Q91Y00 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb2Q91Y00 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb2Q91Y00 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb2Q91Y00 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms