Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Gm9726-201ENSMUST00000180321 678 ntBASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga4Q91XY4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Gm43205-201ENSMUST00000198622 1968 ntBASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 AC158529.1-201ENSMUST00000223618 239 ntBASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga4Q91XY4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga4Q91XY4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga4Q91XY4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga4Q91XY4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga4Q91XY4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga4Q91XY4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga4Q91XY4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga4Q91XY4 AA543401-201ENSMUST00000164248 1269 ntBASIC13.99□□□□□ -0.17
Pcdhga4Q91XY4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhga4Q91XY4 Gm25144-201ENSMUST00000179561 110 ntBASIC13.99□□□□□ -0.17
Pcdhga4Q91XY4 Gm25352-201ENSMUST00000179815 110 ntBASIC13.99□□□□□ -0.17
Pcdhga4Q91XY4 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms