Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.19■□□□□ 0.18
Trex1Q91XB0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.19■□□□□ 0.18
Trex1Q91XB0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Gm5356-201ENSMUST00000093326 615 ntBASIC16.19■□□□□ 0.18
Trex1Q91XB0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trex1Q91XB0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.18■□□□□ 0.18
Trex1Q91XB0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.18■□□□□ 0.18
Trex1Q91XB0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.18■□□□□ 0.18
Trex1Q91XB0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trex1Q91XB0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trex1Q91XB0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Gm11524-201ENSMUST00000119349 807 ntBASIC16.17■□□□□ 0.18
Trex1Q91XB0 Gm15376-201ENSMUST00000122258 783 ntBASIC16.17■□□□□ 0.18
Trex1Q91XB0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Gm6244-201ENSMUST00000178732 841 ntBASIC16.17■□□□□ 0.18
Trex1Q91XB0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.17■□□□□ 0.18
Trex1Q91XB0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Gm2495-201ENSMUST00000191160 466 ntBASIC16.17■□□□□ 0.18
Trex1Q91XB0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.17■□□□□ 0.18
Trex1Q91XB0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Mir497b-201ENSMUST00000093601 125 ntBASIC16.17■□□□□ 0.18
Trex1Q91XB0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.17■□□□□ 0.18
Trex1Q91XB0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms