Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.76□□□□□ -0.37
Odf4Q8VI88 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Gm16198-201ENSMUST00000118766 670 ntBASIC12.75□□□□□ -0.37
Odf4Q8VI88 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.75□□□□□ -0.37
Odf4Q8VI88 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Gm7063-201ENSMUST00000186840 981 ntBASIC12.75□□□□□ -0.37
Odf4Q8VI88 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Odf4Q8VI88 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Odf4Q8VI88 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.74□□□□□ -0.37
Odf4Q8VI88 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Gm18889-201ENSMUST00000174284 929 ntBASIC12.74□□□□□ -0.37
Odf4Q8VI88 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Mir6990-201ENSMUST00000183724 91 ntBASIC12.74□□□□□ -0.37
Odf4Q8VI88 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.74□□□□□ -0.37
Odf4Q8VI88 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Odf4Q8VI88 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Odf4Q8VI88 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Odf4Q8VI88 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Odf4Q8VI88 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Odf4Q8VI88 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Odf4Q8VI88 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Odf4Q8VI88 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Odf4Q8VI88 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Odf4Q8VI88 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Odf4Q8VI88 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Odf4Q8VI88 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms