Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm11452-201ENSMUST00000122376 690 ntBASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Gm18489-201ENSMUST00000172565 551 ntBASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Gm7230-201ENSMUST00000173026 815 ntBASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Gm5682-201ENSMUST00000173402 505 ntBASIC14.36□□□□□ -0.11
Slf1Q8R3P9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Gm37153-201ENSMUST00000193637 231 ntBASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.36□□□□□ -0.11
Slf1Q8R3P9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slf1Q8R3P9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Mir8098-201ENSMUST00000184011 137 ntBASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Gm43767-201ENSMUST00000198933 381 ntBASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.35□□□□□ -0.11
Slf1Q8R3P9 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slf1Q8R3P9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slf1Q8R3P9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Slf1Q8R3P9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Slf1Q8R3P9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Slf1Q8R3P9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Slf1Q8R3P9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slf1Q8R3P9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.33□□□□□ -0.12
Slf1Q8R3P9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Slf1Q8R3P9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Slf1Q8R3P9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slf1Q8R3P9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Slf1Q8R3P9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms