Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubqln1Q8R317 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm24158-201ENSMUST00000175263 71 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm29310-201ENSMUST00000185468 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21825-201ENSMUST00000185728 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm29109-201ENSMUST00000185895 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21896-201ENSMUST00000186520 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21873-201ENSMUST00000186728 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21794-201ENSMUST00000187056 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21880-201ENSMUST00000187275 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21826-201ENSMUST00000187451 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21198-201ENSMUST00000188393 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21749-201ENSMUST00000189343 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21901-201ENSMUST00000189568 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm29424-201ENSMUST00000189716 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm28599-201ENSMUST00000189838 694 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21867-201ENSMUST00000189917 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm29269-201ENSMUST00000190087 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21722-201ENSMUST00000190153 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm28423-201ENSMUST00000190701 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21899-201ENSMUST00000190745 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21910-201ENSMUST00000191163 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21849-201ENSMUST00000191571 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm28678-201ENSMUST00000191593 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm20910-201ENSMUST00000193268 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm21871-201ENSMUST00000194621 696 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm5312-201ENSMUST00000203728 547 ntBASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubqln1Q8R317 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Gm12882-201ENSMUST00000121696 517 ntBASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubqln1Q8R317 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ubqln1Q8R317 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Ubqln1Q8R317 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ubqln1Q8R317 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ubqln1Q8R317 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ubqln1Q8R317 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ubqln1Q8R317 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubqln1Q8R317 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.45□□□□□ -0.26
Ubqln1Q8R317 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ubqln1Q8R317 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ubqln1Q8R317 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms