Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afjQ8R1M2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Psmb5-202ENSMUST00000227257 622 ntBASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afjQ8R1M2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Gm13597-201ENSMUST00000121239 375 ntBASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afjQ8R1M2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afjQ8R1M2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afjQ8R1M2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afjQ8R1M2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afjQ8R1M2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
H2afjQ8R1M2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afjQ8R1M2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
H2afjQ8R1M2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afjQ8R1M2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afjQ8R1M2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms